Hello Mark,
I'm still getting the same alerts, eg for wp-includes/version.php:
The Original Version of the file
34 */
35 $required_mysql_version = '5.0';
36
The Modified Version on your WordPress system
34 */
35 $required_mysql_version = '5.0';
36
37 $wp_local_package = 'it_IT';
This is for WP 3.9.1
thank you